Analytical platforms for activity-based protein profiling – exploiting the versatility of chemistry for functional proteomics

Literature Information

Publication Date 2006-04-25
DOI 10.1039/B600653C
Impact Factor 6.222
Authors

Stephan A. Sieber, Benjamin F. Cravatt


View Original

Abstract

The field of proteomics aims to develop and apply technologies for the characterization of protein function on a global scale. Toward this end, synthetic chemistry has played a major role by providing new reagents to profile segments of the proteome based on activity rather than abundance. Small molecule probes for activity-based protein profiling have been created for more than a dozen enzyme classes and used to discover several enzyme activities elevated in disease states. These innovations have inspired complementary advancements in analytical chemistry, where new platforms have been introduced to augment the information content achievable in chemical proteomics experiments. Here, we will review these analytical platforms and discuss how they have exploited the versatility of chemical probes to gain unprecedented insights into the function of proteins in biological samples of high complexity.

Related Literature

Electro-catalytic oxidative cleavage of lignin in a protic ionic liquid

Elena Reichert, Reiner Wintringer, Dietrich A. Volmer, Rolf Hempelmann

2012-02-07 Paper

DOI: 10.1039/C2CP23596J

Generation of (nonafluoro-tert-butoxy)methyl ponytails for enhanced fluorous partition of aromatics and heterocycles

Xi Zhao, Wing Yan Ng, Kai-Chung Lau, Alana E. C. Collis, István T. Horváth

2012-01-16 Paper

DOI: 10.1039/C2CP23113A

Insights from impedance spectroscopy into the mechanism of thermal decomposition of M(NH2BH3), M = H, Li, Na, Li0.5Na0.5, hydrogen stores‡

Karol J. Fijalkowski, Rafał Jurczakowski, Wiktor Koźmiński

2012-03-20 Paper

DOI: 10.1039/C2CP23344D

3D-RISM-KH molecular theory of solvation and density functional theory investigation of the role of water in the aggregation of model asphaltenes

S. R. Stoyanov, S. Gusarov, X. Tan, M. R. Gray, J. M. Stryker, R. Tykwinski, J. W. de M. Carneiro, H. Sato, P. R. Seidl

2011-12-09 Paper

DOI: 10.1039/C2CP23131J

Probing the structural and electronic properties of small vanadium monoxide clusters

Huai-Qian Wang, Xiao-Yu Kuang

2012-02-14 Paper

DOI: 10.1039/C2CP40112F

Light harvestingzinc naphthalocyanine–perylenediimide supramolecular dyads: long-lived charge-separated states in nonpolar media

Ana M. Gutiérrez, Ángela Sastre-Santos, Fernando Fernández-Lázaro

2012-01-18 Paper

DOI: 10.1039/C2CP23285E

LaCoO3 acting as an efficient and robust catalyst for photocatalytic water oxidation with persulfate

Yusuke Yamada, Kentaro Yano, Dachao Hong

2012-02-17 Paper

DOI: 10.1039/C2CP00022A

Excitonic recombination in superstoichiometric nanocrystalline TiO2 grown by cluster precursors at room temperature

Francesca Detto, Nicola Armani, Laura Lazzarini, Tullio Toccoli, Roberto Verucchi, Lucrezia Aversa, Barbara Rossi, Giancarlo Salviati, Salvatore Iannotta

2012-02-28 Paper

DOI: 10.1039/C2CP40120G

The initial step of silicate versusaluminosilicate formation in zeolite synthesis: a reaction mechanism in water with a tetrapropylammonium template

Thuat T. Trinh, Xavier Rozanska, Françoise Delbecq, Philippe Sautet

2012-01-12 Paper

DOI: 10.1039/C2CP23370C

You might also like

Compound Q&A

Is 6-(3-Fluorophenyl)picolinic acid (CAS: 887982-40-3) safe?

6-(3-Fluorophenyl)picolinic acid is generally considered safe for laboratory use...

887982-40-36-(3-Fluorophenyl)pi...
Compound Q&A

What industries use (3R)-3-Pyrrolidinol (CAS: 2799-21-5)?

(3R)-3-Pyrrolidinol is used in the pharmaceutical industry as a precursor for dr...

2799-21-5(3R)-3-Pyrrolidinol
Compound Q&A

What precautions should be taken when handling (4R,5R)-4,5-Diethoxycarbonyl-2,2-dimethyldioxolane (CAS: 59779-75-8)?

When handling (4R,5R)-4,5-Diethoxycarbonyl-2,2-dimethyldioxolane (CAS: 59779-75-...

59779-75-8(4R,5R)-4,5-Diethoxy...
Compound Q&A

How is 1-(6-Chloroimidazo[1,2-b]pyridazin-3-yl)ethanone (CAS: 90734-71-7) typically synthesized?

1-(6-Chloroimidazo[1,2-b]pyridazin-3-yl)ethanone is often synthesized via a mult...

90734-71-71-(6-Chloroimidazo[1...
Compound Q&A

What is the market or research trend for N-Ethyl-3,4-dimethylbenzylamine (CAS: 39180-83-1)?

The market for N-Ethyl-3,4-dimethylbenzylamine (CAS: 39180-83-1) remains steady,...

39180-83-1N-Ethyl-3,4-dimethyl...
Compound Q&A

What is Tert-butyl 3-(pyrrolidin-1-yl)azetidine-1-carboxylate (CAS: 1019008-21-9)?

Tert-butyl 3-(pyrrolidin-1-yl)azetidine-1-carboxylate is a chemical compound wit...

1019008-21-9Tert-butyl 3-(pyrrol...
Compound Q&A

What regulatory guidelines apply to 1-Bromo-3-chloro-2,4-dimethoxybenzene (CAS: 1228956-93-1)?

1-Bromo-3-chloro-2,4-dimethoxybenzene (CAS: 1228956-93-1) falls under the classi...

1228956-93-11-Bromo-3-chloro-2,4...
Compound Q&A

Is 8-Bromo-2-methyl-3,4-dihydroisoquinolin-1(2H)-one (CAS: 1368622-07-4) safe?

The safety of 8-Bromo-2-methyl-3,4-dihydroisoquinolin-1(2H)-one (CAS: 1368622-07...

1368622-07-48-Bromo-2-methyl-3,4...
Compound Q&A

Is Benzyl [(3S)-2,6-dioxo-3-piperidinyl]carbamate (CAS: 22785-43-9) safe?

Benzyl [(3S)-2,6-dioxo-3-piperidinyl]carbamate is generally safe when handled wi...

22785-43-9Benzyl [(3S)-2,6-dio...
Compound Q&A

How should 1-{[4-(4,4,5,5-Tetramethyl-1,3,2-dioxaborolan-2-yl)phenyl]sulfonyl}pyrrolidine (CAS: 928657-21-0) be stored?

1-{[4-(4,4,5,5-Tetramethyl-1,3,2-dioxaborolan-2-yl)phenyl]sulfonyl}pyrrolidine s...

928657-21-01-{[4-(4,4,5,5-Tetra...

Source Journal

Chemical Communications

Chemical Communications
CiteScore: 8.6
Self-citation Rate: 4.7%
Articles per Year: 2458

ChemComm publishes urgent research which is of outstanding significance and interest to experts in the field, while also appealing to the journal’s broad chemistry readership. Our communication format is ideally suited to short, urgent studies that are of such importance that they require accelerated publication. Our scope covers all topics in chemistry, and research at the interface of chemistry and other disciplines (such as materials science, nanoscience, physics, engineering and biology) where there is a significant novelty in the chemistry aspects. Major topic areas covered include: Analytical Chemistry Catalysis Chemical Biology and medicinal chemistry Computational Chemistry and Machine Learning Energy and sustainable chemistry Environmental Chemistry Green Chemistry Inorganic Chemistry Materials Chemistry Nanoscience Organic Chemistry Physical Chemistry Polymer Chemistry Supramolecular Chemistry

Recommended Compounds

Recommended Suppliers

Disclaimer
This page provides academic journal information for reference and research purposes only. We are not affiliated with any journal publishers and do not handle publication submissions. For publication-related inquiries, please contact the respective journal publishers directly.
If you notice any inaccuracies in the information displayed, please contact us at support@chemtradehub.com. We will promptly review and address your concerns.