The impact on the ring related vibrational frequencies of pyridine of hydrogen bonds with haloforms – a topology perspective

Literature Information

Publication Date 2018-12-19
DOI 10.1039/C8CP04789H
Impact Factor 3.676
Authors

Kamila Akhmetova, Haiyan Fan


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Abstract

Hydrogen bonds between pyridine (Py) and haloforms (CHX3, X = F, Cl, Br, I) and their impact on the ring related vibrational frequencies of pyridine were studied using a combination of solution phase FTIR and quantum mechanical DFT and ab initio calculations. With various possibilities for dimers that could potentially be formed between pyridine and haloforms, the calculations identified an intermolecular ring structure, which was established based on both the [Py–]N-involved hydrogen bond and the hydrogen bond between the alpha H on pyridine ([Py–]H) and the halogen atom on the haloform ([CHX2–]X), as the most energetically stable form. The formation of a ring between the two molecules makes the entire ring structure more rigid on one hand, and weakens the [Py–]N-involved hydrogen bond on the other hand. As a result, no significant shift was observed for ν12, and ν10 only experiences a moderate blue shift upon hydrogen bonding. The magnitude of the shift in ν10 is in the order: CHI3 > CHBr3 > CHCl3 > CHF3, according to calculations. FTIR experiments with pyridine and CHCl3/CHBr3/CHI3 in cyclohexane solution showed a consistent sequence. Strong correlation was observed between the values of ν10 and the various interatomic distances among [Py–]N, [Py–]H, [CHX2–]X and [CX3–]H, as well as other topological parameters involving the two bond critical points (BCP1 and BCP2) and the ring critical point (RCP). The percentage contributions from the internal coordinates were also estimated and were closely related to the magnitude of ν10. Moreover, the occupied frontier molecular orbitals of the hydrogen bonding complexes (from HOMO−4 to HOMO) were analyzed to explain their roles in the pyridine ring vibrations and their sensitivity to hydrogen bonding.

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Physical Chemistry Chemical Physics

Physical Chemistry Chemical Physics
CiteScore: 5.5
Self-citation Rate: 10.3%
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Physical Chemistry Chemical Physics (PCCP) is an international journal co-owned by 19 physical chemistry and physics societies from around the world. This journal publishes original, cutting-edge research in physical chemistry, chemical physics and biophysical chemistry. To be suitable for publication in PCCP, articles must include significant innovation and/or insight into physical chemistry; this is the most important criterion that reviewers and Editors will judge against when evaluating submissions. The journal has a broad scope and welcomes contributions spanning experiment, theory, computation and data science. Topical coverage includes spectroscopy, dynamics, kinetics, statistical mechanics, thermodynamics, electrochemistry, catalysis, surface science, quantum mechanics, quantum computing and machine learning. Interdisciplinary research areas such as polymers and soft matter, materials, nanoscience, energy, surfaces/interfaces, and biophysical chemistry are welcomed if they demonstrate significant innovation and/or insight into physical chemistry. Joined experimental/theoretical studies are particularly appreciated when complementary and based on up-to-date approaches.

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