Continuum solvent effects on various isomers of bilirubin

Literature Information

Publication Date 2000-09-01
DOI 10.1039/B004476H
Impact Factor 3.676
Authors

Giuliano Alagona, Caterina Ghio, Susanna Monti


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Abstract

The interconversion of the two “ridge-tile” forms (M and P) of bilirubin, modelled without methyl group substitutions on the heteroaromatic rings, is considered in the gas-phase and in aqueous solution employing the polarizable continuum model (PCM) of the solvent, to elucidate the toxic pigment peculiar solubility features. Single point HF/6-31G* calculations were carried out in acuo and in solution on a few structures along the interconversion path, obtained ia a molecular mechanics (MM) systematic conformational search, MM energy refinement and ab initio HF/3-21G energy minimisation. In order to determine under which form bilirubin is excreted, the stability and the solvation properties displayed by normal (ZZ) bilirubin were compared to those of isomers obtainable by photoirradiation. A few products of the Z→E photoisomerisation were thus model built starting from the ZZ conformers and optimised at the HF/3-21G level. Moreover HF/6-31G* geometry optimisations were carried out on a few selected conformers and the solvent effect was evaluated with PCM at the same level. Møller–Plesset second order correlation corrections, included in the gas phase calculations, stabilised the minimum energy structure with respect to the saddle point of the M–P interconversion potential energy surface. All the results obtained for the isomer conformations here considered, which turned out to be fairly similar to the HF/6-31G*//HF/3-21G ones, in summary, did not show a preferential solvation for the E forms at the ground state. Preliminary calculations on a very small model system might suggest that bilirubin is solvated at the excited state.

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Source Journal

Physical Chemistry Chemical Physics

Physical Chemistry Chemical Physics
CiteScore: 5.5
Self-citation Rate: 10.3%
Articles per Year: 3036

Physical Chemistry Chemical Physics (PCCP) is an international journal co-owned by 19 physical chemistry and physics societies from around the world. This journal publishes original, cutting-edge research in physical chemistry, chemical physics and biophysical chemistry. To be suitable for publication in PCCP, articles must include significant innovation and/or insight into physical chemistry; this is the most important criterion that reviewers and Editors will judge against when evaluating submissions. The journal has a broad scope and welcomes contributions spanning experiment, theory, computation and data science. Topical coverage includes spectroscopy, dynamics, kinetics, statistical mechanics, thermodynamics, electrochemistry, catalysis, surface science, quantum mechanics, quantum computing and machine learning. Interdisciplinary research areas such as polymers and soft matter, materials, nanoscience, energy, surfaces/interfaces, and biophysical chemistry are welcomed if they demonstrate significant innovation and/or insight into physical chemistry. Joined experimental/theoretical studies are particularly appreciated when complementary and based on up-to-date approaches.

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