2'-Deoxy-5-methylcytidine

Basic Information

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CAS Number

838-07-3

Molecular Formula

C10H15N3O4

Molecular Weight

241.25 g/mol

Chemical Classification

Basic Chemical Raw Materials Organic Chemicals Carboxylic Acids

Basic Chemical Raw Materials Organic Chemicals Ethers

Basic Chemical Raw Materials Organic Chemicals Amines

Basic Chemical Raw Materials Organic Chemicals Heterocyclic Compounds

Pharmaceutical Chemicals Pharmaceutical Intermediates Heterocyclic Intermediates

Fine Chemicals Dyes and Pigments Organic Dyes

Basic Physical Properties

Physical State

White to Yellow Solid

Melting Point

193°C

Boiling Point

492.8℃ at 760 mmHg

Density

1.64

Water Solubility

Soluble in water.

Flash Point

251.9 °C

Refractive Index

44 ° (C=1.4, H2O)

SMILES

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CC1=CN(C(=O)N=C1N)C2CC(C(O2)CO)O

InChI

InChI=1S/C10H15N3O4/c1-5-3-13(10(16)12-9(5)11)8-2-6(15)7(4-14)17-8/h3,6-8,14-15H,2,4H2,1H3,(H2,11,12,16)/t6-,7+,8+/m0/s1

InChIKey

LUCHPKXVUGJYGU-XLPZGREQSA-N

LogP

-1.2253799999999995

Topological Polar Surface Area

110.6 Å²

Hydrogen Bond Donor/Acceptor

4 / 7

Complexity

393

Safety Information

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GHS Hazard Pictograms

H302

Hazard Statement

H302 Harmful if swallowed
Acute toxicity, oral

Synonyms & References

English

DS-15250
4-25-00-03727 (Beilstein Handbook Reference)
CHEMBL1234242
BP-58634
4-Amino-1-(4-hydroxy-5-hydroxymethyl-tetrahydro-furan-2-yl)-5-methyl-1H-pyrimidin-2-one
BDBM50028592
AC-8204
AKOS015841918
LUCHPKXVUGJYGU-XLPZGREQSA-N
EN300-1718973
BCP12372
J-700035
5-Methyl-dC
5-Methyl-2'-deoxycytidine
UNII-B200GV71QM
CHEBI:47876
DTXSID401003853
1-(2-Deoxy-beta-D-ribofuranosyl)-5-methylcytosine
CYTIDINE, 2'-DEOXY-5-METHYL-
D3610
CHEMBL159023
Z3234808049
SCHEMBL20268
MCY
MFCD00006549
838-07-3
4-Amino-1-((2R,4S,5R)-4-hydroxy-5-(hydroxymethyl)tetrahydrofuran-2-yl)-5-methylpyrimidin-2(1H)-one
EINECS 212-655-1
5-Methyldeoxycytidine
4-amino-1-[(2R,4S,5R)-4-hydroxy-5-(hydroxymethyl)oxolan-2-yl]-5-methyl-1,2-dihydropyrimidin-2-one
HY-W012078

MDL Number

MFCD00006549

Customs Code

2934999090

FAQ

What is 2'-Deoxy-5-methylcytidine (CAS: 838-07-3)?

2'-Deoxy-5-methylcytidine (CAS: 838-07-3) is a nucleoside analog of cytidine, featuring a methyl group at the 5-position and a deoxyribose sugar. Its chemical formula is C10H14N4O4. It is characterized by its stability in aqueous solutions and is commonly used in biochemical research for studying nucleic acid interactions and enzymatic activities.

What are the main uses of 2'-Deoxy-5-methylcytidine (CAS: 838-07-3)?

2'-Deoxy-5-methylcytidine (CAS: 838-07-3) is primarily used in molecular biology and pharmaceutical research. It serves as a building block for synthesizing nucleic acid derivatives and is also employed in the development of antiviral and antitumor agents. Additionally, it finds applications in DNA sequencing and as a research tool in understanding nucleotide modifications.

Is 2'-Deoxy-5-methylcytidine (CAS: 838-07-3) safe?

2'-Deoxy-5-methylcytidine (CAS: 838-07-3) is generally considered safe when handled properly, but it should be treated with caution. It is not classified as toxic under normal conditions, but prolonged exposure or ingestion may pose health risks. Protective measures such as gloves and proper ventilation are recommended during handling to ensure safety in laboratory settings.

How should 2'-Deoxy-5-methylcytidine (CAS: 838-07-3) be stored?

2'-Deoxy-5-methylcytidine (CAS: 838-07-3) should be stored in a cool, dry place away from light. It is best kept at a temperature between 2°C to 8°C and in a sealed container to prevent moisture ingress. Avoid exposure to strong oxidizing agents to maintain its stability and integrity over time.