Insights into the modular design of kinase inhibitors and application to Abl and Axl

Literature Information

Publication Date 2021-11-05
DOI 10.1039/D1MD00296A
Impact Factor 0
Authors

Sameer Phadke, Lluis Lopez-Barcons, Nathalie Vandecan, Zhifen Wu, Taylor K. Johnson, Eric J. Lachacz, Sofia D. Merajver, Matthew B. Soellner


View Original

Abstract

Scaffold hopping is a common strategy for generating kinase inhibitors that bind to the DFG-out inactive conformation. Small structural differences in inhibitor scaffolds can have significant effects on potency and selectivity across the kinome, however, these effects are often not studied in detail. Herein, we outline a design strategy to generate an array of DFG-out conformation inhibitors with three different hinge-binders and two DFG-pocket groups. We studied inhibitor selectivity across a large segment of the kinome and elucidated binding preferences that can be used in scaffold hopping campaigns. Using these analyses, we identified two selective inhibitors that display low nanomolar potency against Axl or wild-type and clinically relevant mutants of Abl.

Related Literature

Graphdiyne coordinated transition metals as single-atom catalysts for nitrogen fixation

Yanan Tang, Weiguang Chen, Yi Li, Renyi Li, Yaqiang Ma, Xianqi Dai

2020-04-01 Paper

DOI: 10.1039/D0CP00722F

The role of an unintentional carbon dopant in resolving the controversial conductivity aspects in BiFeO3

Shaan Ameer, Kajal Jindal, Monika Tomar, Pradip K. Jha, Vinay Gupta

2020-04-27 Paper

DOI: 10.1039/C9CP06614D

Solar-driven plasmonic heterostructure Ti/TiO2−x with gradient doping for sustainable plasmon-enhanced catalysis

Chaoqun Cheng, Muhammad Nadeem Akram, Ola Nilsen, Nini Pryds, Kaiying Wang

2020-03-16 Paper

DOI: 10.1039/D0CP00672F

Heteronuclear DNP of 1H and 19F nuclei using BDPA as a polarizing agent

Antonio Gennaro, Alexander Karabanov, Alexey Potapov, Walter Köckenberger

2020-03-31 Paper

DOI: 10.1039/D0CP00892C

The effect of N-heterocyclic carbene units on the absorption spectra of Fe(ii) complexes: a challenge for theory

Omar Baig, Oliver Kühn, Leticia González

2020-11-20 Paper

DOI: 10.1039/D0CP04781C

Gas phase reactions of iodide and bromide anions with ozone: evidence for stepwise and reversible reactions‡

Mahendra Bhujel, David L. Marshall, Alan T. Maccarone, Benjamin I. McKinnon, Adam J. Trevitt, Gabriel da Silva, Stephen J. Blanksby, Berwyck L. J. Poad

2020-04-27 Paper

DOI: 10.1039/D0CP01498B

You might also like

155412-88-71-(3-Aminophenyl)-3-...
Compound Q&A

How should waste containing 1-(D-Ribofuranosyl)-1,4-dihydro-3-pyridinecarboxamide (CAS: 19132-12-8) be handled?

Waste containing 1-(D-Ribofuranosyl)-1,4-dihydro-3-pyridinecarboxamide (CAS: 191...

19132-12-81-(D-Ribofuranosyl)-...
Compound Q&A

What regulatory guidelines apply to 2-Methyl-2-propanyl 3-bromo-3-(hydroxymethyl)-1-azetidinecarboxylate (CAS: 2007919-81-3)?

2-Methyl-2-propanyl 3-bromo-3-(hydroxymethyl)-1-azetidinecarboxylate (CAS: 20079...

2007919-81-32-Methyl-2-propanyl ...
Compound Q&A

What is N-(4-Chloro-2-pyridinyl)acetamide (CAS: 245056-66-0)?

N-(4-Chloro-2-pyridinyl)acetamide (CAS: 245056-66-0) is a chemical compound with...

245056-66-0N-(4-Chloro-2-pyridi...
Compound Q&A

What is 5-Chloro-2-hydroxybenzoic acid (CAS: 321-14-2)?

5-Chloro-2-hydroxybenzoic acid, also known as 5-chlorosalicylic acid, is an arom...

321-14-25-Chloro-2-hydroxybe...
Compound Q&A

What precautions should be taken when handling 1,1-Dichloro-1-fluoroethane (CAS: 1717-00-6)?

When handling 1,1-Dichloro-1-fluoroethane (CAS: 1717-00-6), it is important to u...

1717-00-61,1-Dichloro-1-fluor...
Compound Q&A

What are the physical and chemical properties of Fmoc-(2S,3R)-3-phenylpyrrolidine-2-carboxylic acid (CAS: 281655-32-1)?

Fmoc-(2S,3R)-3-phenylpyrrolidine-2-carboxylic acid is a white crystalline solid ...

281655-32-1Fmoc-(2S,3R)-3-pheny...
Compound Q&A

What are the main uses of 4-Amino-5-bromo-2-pyridinecarboxylic acid (CAS: 1363381-01-4)?

4-Amino-5-bromo-2-pyridinecarboxylic acid is primarily used as a precursor in th...

1363381-01-44-Amino-5-bromo-2-py...
1007881-98-2(S)-tert-butyl 2-((2...
Compound Q&A

What precautions should be taken when handling 8-bromo-2,2-dimethyl-3,4-dihydro-2H-1,4-benzoxazin-3-one (CAS: 688363-73-7)?

When handling 8-bromo-2,2-dimethyl-3,4-dihydro-2H-1,4-benzoxazin-3-one, use prop...

688363-73-78-bromo-2,2-dimethyl...
Disclaimer
This page provides academic journal information for reference and research purposes only. We are not affiliated with any journal publishers and do not handle publication submissions. For publication-related inquiries, please contact the respective journal publishers directly.
If you notice any inaccuracies in the information displayed, please contact us at support@chemtradehub.com. We will promptly review and address your concerns.