A sensitive fluorescent probe for the polar solvation dynamics at protein–surfactant interfaces

Literature Information

Publication Date 2017-04-18
DOI 10.1039/C6CP08804J
Impact Factor 3.676
Authors

Priya Singh, Susobhan Choudhury, Subhankar Singha, Yongwoong Jun, Sandipan Chakraborty, Jhimli Sengupta, Ranjan Das, Kyo-Han Ahn, Samir Kumar Pal


View Original

Abstract

Relaxation dynamics at the surface of biologically important macromolecules is important taking into account their functionality in molecular recognition. Over the years it has been shown that the solvation dynamics of a fluorescent probe at biomolecular surfaces and interfaces account for the relaxation dynamics of polar residues and associated water molecules. However, the sensitivity of the dynamics depends largely on the localization and exposure of the probe. For noncovalent fluorescent probes, localization at the region of interest in addition to surface exposure is an added challenge compared to the covalently attached probes at the biological interfaces. Here we have used a synthesized donor–acceptor type dipolar fluorophore, 6-acetyl-(2-((4-hydroxycyclohexyl)(methyl)amino)naphthalene) (ACYMAN), for the investigation of the solvation dynamics of a model protein–surfactant interface. A significant structural rearrangement of a model histone protein (H1) upon interaction with anionic surfactant sodium dodecyl sulphate (SDS) as revealed from the circular dichroism (CD) studies is nicely corroborated in the solvation dynamics of the probe at the interface. The polarization gated fluorescence anisotropy of the probe compared to that at the SDS micellar surface clearly reveals the localization of the probe at the protein–surfactant interface. We have also compared the sensitivity of ACYMAN with other solvation probes including coumarin 500 (C500) and 4-(dicyanomethylene)-2-methyl-6-(p-dimethylamino-styryl)-4H-pyran (DCM). In comparison to ACYMAN, both C500 and DCM fail to probe the interfacial solvation dynamics of a model protein–surfactant interface. While C500 is found to be delocalized from the protein–surfactant interface, DCM becomes destabilized upon the formation of the interface (protein–surfactant complex). The timescales obtained from this novel probe have also been compared with other femtosecond resolved studies and molecular dynamics simulations.

Related Literature

Low-temperature combustion chemistry of biofuels: pathways in the initial low-temperature (550 K–750 K) oxidation chemistry of isopentanol‡

Oliver Welz, Judit Zádor, John D. Savee, Martin Y. Ng, Giovanni Meloni, Leonid Sheps, Taek Soon Lee, David L. Osborn, Craig A. Taatjes

2012-01-05 Paper

DOI: 10.1039/C2CP23248K

Contents list

Front/Back Matter

DOI: 10.1039/C3CP90017G

Contents list

Front/Back Matter

DOI: 10.1039/C2CP90007F

Orientation effects in Cl + H2 inelastic collisions: characterization of the mechanisms

J. Aldegunde, F. J. Aoiz, L. González-Sánchez, M. P. de Miranda, V. Sáez-Rábanos

2011-12-14 Paper

DOI: 10.1039/C2CP23252A

Water ice nanoparticles: size and temperature effects on the mid-infrared spectrum

Chris Medcraft, Don McNaughton, Chris D. Thompson, Dominique R. T. Appadoo, Sigurd Bauerecker, Evan G. Robertson

2013-01-21 Paper

DOI: 10.1039/C3CP43974G

A large sample volume magic angle spinning nuclear magnetic resonance probe for in situ investigations with constant flow of reactants

Jian Zhi Hu, Jesse A. Sears, Hardeep S. Mehta, Joseph J. Ford, Ja Hun Kwak, Kake Zhu, Yong Wang, Jun Liu, David W. Hoyt, Charles H. F. Peden

2011-10-24 Paper

DOI: 10.1039/C1CP22692D

Design of efficient methanol impermeable membranes for fuel cell applications

F. Lufrano, V. Baglio, O. Di Blasi, P. Staiti, V. Antonucci, A. S. Aricò

2012-01-05 Paper

DOI: 10.1039/C2CP23477G

Dissociation energies of X–H bonds in amino acids

Benjamin N. Moore, Ryan R. Julian

2012-01-30 Paper

DOI: 10.1039/C2CP23443B

Effect of potential on temperature-dependent SERS spectra of neuromedin B on Cu electrode

Ilja Ignatjev, Edyta Proniewicz, Leonard M. Proniewicz, Gediminas Niaura

2012-11-16 Paper

DOI: 10.1039/C2CP42077E

You might also like

Compound Q&A

How should 2-Methylbenzene-1,4-diamine dihydrochloride (CAS: 615-45-2) be stored?

2-Methylbenzene-1,4-diamine dihydrochloride (CAS: 615-45-2) should be stored in ...

615-45-22-Methylbenzene-1,4-...
Compound Q&A

Is (1S,4S)-2,5-Diazabicyclo[2.2.1]heptane dihydrobromide (CAS: 132747-20-7) safe?

(1S,4S)-2,5-Diazabicyclo[2.2.1]heptane dihydrobromide is generally considered sa...

132747-20-7(1S,4S)-2,5-Diazabic...
Compound Q&A

What industries use (6-Chloropyridazin-3-YL)methanamine (CAS: 871826-15-2)?

(6-Chloropyridazin-3-YL)methanamine finds applications in the pharmaceutical ind...

871826-15-2(6-Chloropyridazin-3...
Compound Q&A

What are the main uses of 2-Fluoro-3-methylphenol (CAS: 77772-72-6)?

2-Fluoro-3-methylphenol is primarily used in the synthesis of pharmaceuticals, p...

77772-72-62-Fluoro-3-methylphe...
Compound Q&A

What precautions should be taken when handling 3-Methoxy-4-nitrobenzonitrile (CAS: 177476-75-4)?

When handling 3-Methoxy-4-nitrobenzonitrile, it is important to wear appropriate...

177476-75-43-Methoxy-4-nitroben...
Compound Q&A

What precautions should be taken when handling 1,3-Oxazolo[4,5-b]pyridine-2(3H)-thione (CAS: 211949-57-4)?

When handling 1,3-Oxazolo[4,5-b]pyridine-2(3H)-thione (CAS: 211949-57-4), it is ...

211949-57-4[1,3]Oxazolo[4,5-b]p...
Compound Q&A

What regulatory guidelines apply to 4-Ethynylbenzamide (CAS: 90347-86-7)?

4-Ethynylbenzamide (CAS: 90347-86-7) falls under various regulatory guidelines i...

90347-86-74-Ethynylbenzamide
Compound Q&A

What are the main uses of 3-(2-Ethylphenyl)-2-thioxo-4-imidazolidinone (CAS: 186822-57-1)?

3-(2-Ethylphenyl)-2-thioxo-4-imidazolidinone is primarily used as an intermediat...

186822-57-13-(2-Ethylphenyl)-2-...
Compound Q&A

What is (2-Fluoro-6-methoxyphenyl)acetic acid (CAS: 500912-19-6)?

(2-Fluoro-6-methoxyphenyl)acetic acid, also known as 4-fluoro-3-methoxybenzoic a...

500912-19-6(2-Fluoro-6-methoxyp...
Compound Q&A

What is the market or research trend for 2-[4-(Hydroxymethyl)phenoxy]ethanol (CAS: 102196-18-9)?

Market trends for 2-[4-(Hydroxymethyl)phenoxy]ethanol (CAS: 102196-18-9) indicat...

102196-18-92-[4-(Hydroxymethyl)...

Source Journal

Physical Chemistry Chemical Physics

Physical Chemistry Chemical Physics
CiteScore: 5.5
Self-citation Rate: 10.3%
Articles per Year: 3036

Physical Chemistry Chemical Physics (PCCP) is an international journal co-owned by 19 physical chemistry and physics societies from around the world. This journal publishes original, cutting-edge research in physical chemistry, chemical physics and biophysical chemistry. To be suitable for publication in PCCP, articles must include significant innovation and/or insight into physical chemistry; this is the most important criterion that reviewers and Editors will judge against when evaluating submissions. The journal has a broad scope and welcomes contributions spanning experiment, theory, computation and data science. Topical coverage includes spectroscopy, dynamics, kinetics, statistical mechanics, thermodynamics, electrochemistry, catalysis, surface science, quantum mechanics, quantum computing and machine learning. Interdisciplinary research areas such as polymers and soft matter, materials, nanoscience, energy, surfaces/interfaces, and biophysical chemistry are welcomed if they demonstrate significant innovation and/or insight into physical chemistry. Joined experimental/theoretical studies are particularly appreciated when complementary and based on up-to-date approaches.

Recommended Compounds

Recommended Suppliers

Disclaimer
This page provides academic journal information for reference and research purposes only. We are not affiliated with any journal publishers and do not handle publication submissions. For publication-related inquiries, please contact the respective journal publishers directly.
If you notice any inaccuracies in the information displayed, please contact us at support@chemtradehub.com. We will promptly review and address your concerns.