Excited-state deactivation in 8-oxo-deoxyguanosine: comparison between anionic and neutral forms

Literature Information

Publication Date 2015-11-23
DOI 10.1039/C5CP05804J
Impact Factor 3.676
Authors

Deniz Tuna, Wolfgang Domcke


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Abstract

8-Oxoguanine is the most abundant oxidation product found in oxidatively damaged DNA. The study of the excited-state properties of the corresponding deoxyribonucleoside 8-oxo-deoxyguanosine is thus of important biological relevance. Herein, we present an ADC(2)-s ab initio study of the neutral and the anionic form of 8-oxo-deoxyguanosine, for each of which we have considered the intramolecularly 5′-O–H⋯N3 hydrogen-bonded syn conformer. We present energy profiles for a radiationless deactivation mechanism via intramolecular excited-state proton transfer. This mechanism is accessible in the neutral form, but it is unavailable in the anion. We present optimized structures for the proton-transfer conical intersection of the neutral form as well as the ring-puckered conical intersections inherent to the 8-oxoguanine moiety for the neutral and anionic forms. We highlight the possible relevance of the proton-transfer mechanism for the neutral form and discuss our results in light of several recently published computational and spectroscopic studies. Our results provide new insight into the photophysics of this biologically relevant nucleoside and pave the way for future nonadiabatic dynamics studies and for further spectroscopic investigations.

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Physical Chemistry Chemical Physics

Physical Chemistry Chemical Physics
CiteScore: 5.5
Self-citation Rate: 10.3%
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Physical Chemistry Chemical Physics (PCCP) is an international journal co-owned by 19 physical chemistry and physics societies from around the world. This journal publishes original, cutting-edge research in physical chemistry, chemical physics and biophysical chemistry. To be suitable for publication in PCCP, articles must include significant innovation and/or insight into physical chemistry; this is the most important criterion that reviewers and Editors will judge against when evaluating submissions. The journal has a broad scope and welcomes contributions spanning experiment, theory, computation and data science. Topical coverage includes spectroscopy, dynamics, kinetics, statistical mechanics, thermodynamics, electrochemistry, catalysis, surface science, quantum mechanics, quantum computing and machine learning. Interdisciplinary research areas such as polymers and soft matter, materials, nanoscience, energy, surfaces/interfaces, and biophysical chemistry are welcomed if they demonstrate significant innovation and/or insight into physical chemistry. Joined experimental/theoretical studies are particularly appreciated when complementary and based on up-to-date approaches.

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