The intermolecular NOE is strongly influenced by dynamics

Literature Information

Publication Date 2015-02-18
DOI 10.1039/C4CP04779F
Impact Factor 3.676
Authors

Daniel Braun, Othmar Steinhauser


View Original

Abstract

The intermolecular NOE in NMR spectroscopy is analyzed theoretically via computer simulation. Our test case is the homonuclear NOE between hydrogens in the ionic liquid 1-ethyl-3-methylimidazolium trifluoromethanesulfonate. A coarse-grained model of this system is developed and simulated in a 3 microseconds molecular dynamics run, subsequently used for analysis. Our findings are the following: Spin pair specific dynamics has a strong influence on the spectrum. As a consequence, structural information cannot be read off directly. Instead, different contributions to the signals must be disentangled before one can gain information about structure. We show that the extent of signal distortion through dynamics correlates with the spins' distance to their respective molecular centers of mass. Since we deal with pair distributions of spins, the extracted structure does not represent average distances between two spins but the sum of the influence of surrounding spins. In fact, we find that this influence is long-ranged. Our data explicitly shows that the usual 1/r6 dependence is replaced by a distance dependence between 1/r3 and 1/r. However, structural information consists of a spin pair specific short-ranged contribution and a uniform long-ranged contribution. The transition from specific to uniform is sensitive to the behavior of the underlying pair distribution functions.

Related Literature

Pyrolysis of organotin compounds: A preparative method for nanometric tin dioxide powders

A. G. Pereira, A. O. Porto, G. G. Silva, G. M. de Lima, H. G. L. Siebald, J. L. Neto

2002-08-22 Paper

DOI: 10.1039/B204476P

Correlated ab initio study of nucleic acid bases and their tautomers in the gas phase, in a microhydrated environment and in aqueous solution Part 1. Cytosine

Semen A. Trygubenko, Tetyana V. Bogdan, Manuel Rueda, Modesto Orozco, F. Javier Luque, Jiří Šponer, Petr Slavíček, Pavel Hobza

2002-07-25 Paper

DOI: 10.1039/B202156K

FTIR study of low-temperature CO adsorption on high surface area tin(iv) oxide: Probing Lewis and Brønsted acidity

Patrick Gélin, Laurent Périer-Camby, Hélène Praliaud, Gérard Thomas

2002-08-28 Paper

DOI: 10.1039/B206336K

Monte Carlo simulations of ion selectivity in a biological Na channel: Charge–space competition

Dezső Boda, David D. Busath, Bob Eisenberg, Douglas Henderson, Wolfgang Nonner

2002-09-18 Paper

DOI: 10.1039/B203686J

Computational and NMR study of quaternary ammonium ion conformations in solution

Victor B. Luzhkov, Fredrik Österberg, Parag Acharya, Jyoti Chattopadhyaya, Johan Åqvist

2002-08-29 Paper

DOI: 10.1039/B203526J

Critical dilution

2002-07-24 Paper

DOI: 10.1039/B111701G

Ultrafast energy relaxation in bacteriorhodopsin studied by time-integrated fluorescence

S. Schenkl, E. Portuondo, G. Zgrablić, M. Chergui, S. Haacke, N. Friedman, M. Sheves

2002-09-19 Paper

DOI: 10.1039/B205453A

You might also like

Compound Q&A

How should waste containing 2-Ethyl-4-Methyl-1H-Imidazole-5-Carbaldehyde (CAS: 88634-80-4) be handled?

Waste containing 2-Ethyl-4-Methyl-1H-Imidazole-5-Carbaldehyde (CAS: 88634-80-4) ...

88634-80-42-Ethyl-4-Methyl-1H-...
Compound Q&A

What industries use Triethoxy(octyl)silane (CAS: 1385031-14-0)?

Triethoxy(octyl)silane (CAS: 1385031-14-0) is widely used in the pharmaceuticals...

1385031-14-0Triethoxy(octyl)sila...
Compound Q&A

Are there alternatives to 3-iodo-7-nitro-1H-indazole (CAS: 864724-64-1) in synthesis?

Several alternatives to 3-iodo-7-nitro-1H-indazole (CAS: 864724-64-1) exist in t...

864724-64-13-iodo-7-nitro-1H-in...
Compound Q&A

Are there alternatives to Benzene, bis[(trimethoxysilyl)ethyl] (CAS: 266317-71-9) in synthesis?

Yes, there are alternatives to Benzene, bis[(trimethoxysilyl)ethyl] (CAS: 266317...

266317-71-9Benzene, bis[(trimet...
Compound Q&A

Is Isothiazole-3-carbonitrile (CAS: 1452-17-1) safe?

Isothiazole-3-carbonitrile (CAS: 1452-17-1) is generally considered safe when us...

1452-17-1Isothiazole-3-carbon...
Compound Q&A

Is (3-Chlorophenyl)methanol (CAS: 873-63-2) safe?

(3-Chlorophenyl)methanol (CAS: 873-63-2) is considered low to moderately toxic. ...

873-63-2(3-Chlorophenyl)meth...
Compound Q&A

How is (2S,3S)-2-Hydroxy-3-({[(2-methyl-2-propanyl)oxy]carbonyl}amino)-3-(2-naphthyl)propanoic acid (CAS: 959583-98-3) typically synthesized?

(2S,3S)-2-Hydroxy-3-({[(2-methyl-2-propanyl)oxy]carbonyl}amino)-3-(2-naphthyl)pr...

959583-98-3(2S,3S)-2-Hydroxy-3-...
Compound Q&A

What precautions should be taken when handling Methyl 2-(bromomethyl)-5-methoxybenzoate (CAS: 788081-99-2)?

Proper handling of methyl 2-(bromomethyl)-5-methoxybenzoate requires the use of ...

788081-99-2Methyl 2-(bromomethy...
Compound Q&A

What is 6,8-Dibromoimidazo[1,2-a]pyridine-2-carboxylic acid (CAS: 904805-36-3)?

6,8-Dibromoimidazo[1,2-a]pyridine-2-carboxylic acid (CAS: 904805-36-3) is an aro...

904805-36-36,8-Dibromoimidazo[1...
Compound Q&A

Is 3-Amino-5-bromo-2-pyridinecarbonitrile (CAS: 573675-27-1) safe?

3-Amino-5-bromo-2-pyridinecarbonitrile is considered safe when handled under pro...

573675-27-13-Amino-5-bromo-2-py...

Source Journal

Physical Chemistry Chemical Physics

Physical Chemistry Chemical Physics
CiteScore: 5.5
Self-citation Rate: 10.3%
Articles per Year: 3036

Physical Chemistry Chemical Physics (PCCP) is an international journal co-owned by 19 physical chemistry and physics societies from around the world. This journal publishes original, cutting-edge research in physical chemistry, chemical physics and biophysical chemistry. To be suitable for publication in PCCP, articles must include significant innovation and/or insight into physical chemistry; this is the most important criterion that reviewers and Editors will judge against when evaluating submissions. The journal has a broad scope and welcomes contributions spanning experiment, theory, computation and data science. Topical coverage includes spectroscopy, dynamics, kinetics, statistical mechanics, thermodynamics, electrochemistry, catalysis, surface science, quantum mechanics, quantum computing and machine learning. Interdisciplinary research areas such as polymers and soft matter, materials, nanoscience, energy, surfaces/interfaces, and biophysical chemistry are welcomed if they demonstrate significant innovation and/or insight into physical chemistry. Joined experimental/theoretical studies are particularly appreciated when complementary and based on up-to-date approaches.

Recommended Compounds

Recommended Suppliers

Disclaimer
This page provides academic journal information for reference and research purposes only. We are not affiliated with any journal publishers and do not handle publication submissions. For publication-related inquiries, please contact the respective journal publishers directly.
If you notice any inaccuracies in the information displayed, please contact us at support@chemtradehub.com. We will promptly review and address your concerns.