Formation, isomerization, and dissociation of ε- and α-carbon-centered tyrosylglycylglycine radical cations

Literature Information

Publication Date 2014-09-19
DOI 10.1039/C4CP03119A
Impact Factor 3.676
Authors

Cheuk-Kuen Lai, Xiaoyan Mu, Qiang Hao, Alan C. Hopkinson, Ivan K. Chu


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Abstract

The fragmentation products of the ε-carbon-centered radical cations [Yε˙LG]+ and [Yε˙GL]+, made by 266 nm laser photolysis of protonated 3-iodotyrosine-containing peptides, are substantially different from those of their π-centered isomers [Yπ˙LG]+ and [Yπ˙GL]+, made by dissociative electron transfer from ternary metal–ligand–peptide complexes. For leucine-containing peptides the major pathway for the ε-carbon-centered radical cations is loss of the side chain of the leucine residue forming [YGα˙G]+ and [YGGα˙]+, whereas for the π-radicals it is the side chain of the tyrosine residue that is lost, giving [Gα˙LG]+ and [Gα˙GL]+. The fragmentations of the product ions [YGα˙G]+ and [YGGα˙]+ are compared with those of the isomeric [Yε˙GG]+ and [Yπ˙GG]+ ions. The collision-induced spectra of ions [Yε˙GG]+ and [YGGα˙]+ are identical, showing that interconversion occurs prior to dissociation. For ions [Yε˙GG]+, [Yπ˙GG]+ and [YGα˙G]+ the dissociation products are all distinctly different, indicating that dissociation occurs more readily than isomerization. Density functional theory calculations at B3LYP/6-31++G(d,p) gave the relative enthalpies (in kcal mol−1 at 0 K) of the five isomers to be [Yε˙GG]+ 0, [Yπ˙GG]+ −23.7, [YGGα˙]+ −28.7, [YGα˙G]+ −31.0 and [Yα˙GG]+ −38.5. Migration of an α-C–H atom from the terminal glycine residue to the ε-carbon-centered radical in the tyrosine residue, a 1−11 hydrogen atom shift, has a low barrier, 15.5 kcal mol−1 above [Yε˙GG]+. By comparison, isomerization of [Yε˙GG]+ to [YGα˙G]+ by a 1–8 hydrogen atom migration from the α-C–H atom of the central glycine residue has a much higher barrier (50.6 kcal mol−1); similarly conversion of [Yε˙GG]+ into [Yπ˙GG]+ has a higher energy (24.4 kcal mol−1).

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Physical Chemistry Chemical Physics

Physical Chemistry Chemical Physics
CiteScore: 5.5
Self-citation Rate: 10.3%
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Physical Chemistry Chemical Physics (PCCP) is an international journal co-owned by 19 physical chemistry and physics societies from around the world. This journal publishes original, cutting-edge research in physical chemistry, chemical physics and biophysical chemistry. To be suitable for publication in PCCP, articles must include significant innovation and/or insight into physical chemistry; this is the most important criterion that reviewers and Editors will judge against when evaluating submissions. The journal has a broad scope and welcomes contributions spanning experiment, theory, computation and data science. Topical coverage includes spectroscopy, dynamics, kinetics, statistical mechanics, thermodynamics, electrochemistry, catalysis, surface science, quantum mechanics, quantum computing and machine learning. Interdisciplinary research areas such as polymers and soft matter, materials, nanoscience, energy, surfaces/interfaces, and biophysical chemistry are welcomed if they demonstrate significant innovation and/or insight into physical chemistry. Joined experimental/theoretical studies are particularly appreciated when complementary and based on up-to-date approaches.

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