Supersonic jet UV spectrum and nonradiative processes of the thymine analogue 5-methyl-2-hydroxypyrimidine

Literature Information

Publication Date 2010-03-06
DOI 10.1039/B924395J
Impact Factor 3.676
Authors

Simon Lobsiger, Hans-Martin Frey, Samuel Leutwyler


View Original

Abstract

We investigate the infrared and electronic absorption spectra and the excited-state nonradiative processes of supersonic jet-cooled 5-methyl-2-hydroxypyrimidine (5M2HP), the enol form of deoxythymine, using two-color resonant two-photon ionization (R2PI) and infrared–UV depletion spectroscopies. Unlike uracil and thymine, which exhibit structureless electronic absorption spectra, the vibronic spectrum of 5M2HP is structured with narrow vibronic bands, allowing for the first time to probe the excited state of a thymine analogue. The S0 state infrared depletion spectrum shows an O–H and no N–H stretch band, identifying the spectrum as that of the enol tautomer. The S1 ← S0 electronic transition is 1nπ*, as evidenced by the rotational contour of the 000 band. Vibronic excitations of the in-plane benzene-type vibrations , , and are observed, while none are observed for the out-of plane fundamental excitations, implying that the 1nπ* excited state of 5M2HP has a planar pyrimidine frame. From 1200 to 3600 cm−1 the vibronic bands become steadily broader, signaling a coupling to a lower-lying electronic state that increases with increasing energy. At ∼3600 cm−1 above the origin, the R2PI spectrum broadens completely, indicating that the two states are strongly mixed. Delayed ionization measurements show that the coupled electronic state has a >5 μs lifetime. No fluorescence has been observed from the 1nπ* state, implying relaxation to the lower-lying long-lived state is very efficient. Separate ionization potentials are measured for the 1nπ* state (9.178 eV) and for the long-lived state (∼9.46 eV), hence the latter lies ∼2200 cm−1 below the 1nπ* state. Time-dependent B3LYP calculations of the excited states of 5M2HP indeed predict the S1 state to be 1nπ* with a planar hydroxypyrimidine moiety. The T1 (3ππ*) state is calculated to lie 3000 cm−1 below the S1 state, in excellent agreement with the experiment.

Related Literature

Shape of CeO2nanoparticles using simulated amorphisation and recrystallisation

Thi X. T. Sayle, Stephen C. Parker, Dean C. Sayle

2004-09-21 Communication

DOI: 10.1039/B408752F

An enantioselective imprinted receptor for Z-glutamate exhibiting a binding induced color change

Panagiotis Manesiotis, Andrew J. Hall, Marco Emgenbroich, Milena Quaglia, Ersilia De Lorenzi, Börje Sellergren

2004-09-09 Communication

DOI: 10.1039/B407870E

Strategies toward improving the performance of fluorescence-based sensors for inorganic anions

Radek Pohl, Dmitry Aldakov, Pavel Kubát, Karolina Jursíková, Manuel Marquez, Pavel Anzenbacher, Jr.

2004-05-10 Communication

DOI: 10.1039/B315268E

Microwave induced preparation of a-axis oriented double-ended needle-shaped ZnO microparticles

Deirdre Ledwith, Suresh C. Pillai, Graeme W. Watson, John M. Kelly

2004-09-01 Communication

DOI: 10.1039/B407768G

Olefincopolymerizationvia reversible addition–fragmentation chain transfer

Rajan Venkatesh, Bastiaan B P Staal, Bert Klumperman

2004-05-20 Communication

DOI: 10.1039/B403342F

A new series of sodium cobalt oxyhydrates

Donna C. Arnold, Chris J. Nuttall, Alexandros Lappas

2004-09-21 Communication

DOI: 10.1039/B405907G

K6Cd4Sn3Se13: A polar open-framework compound based on the partially destroyed supertetrahedral [Cd4Sn4Se17]10− cluster

Nan Ding, Duck-Young Chung, Mercouri G. Kanatzidis

2004-04-23 Communication

DOI: 10.1039/B402686A

Supramolecular complex composed of a covalently linked zinc porphyrin dimer and fulleropyrrolidine bearing two axially coordinating pyridine entities

Francis D'Souza, Suresh Gadde, Melvin E. Zandler, Mitsunari Itou, Yasuyuki Araki, Osamu Ito

2004-09-08 Communication

DOI: 10.1039/B407985J

You might also like

Compound Q&A

What precautions should be taken when handling 2-Chloro-1,2-bis(4-methylphenyl)ethanone (CAS: 71193-32-3)?

When handling 2-Chloro-1,2-bis(4-methylphenyl)ethanone (CAS: 71193-32-3), it is ...

71193-32-32-Chloro-1,2-bis(4-m...
Compound Q&A

What industries use 4-Ethoxy-3-(5-methyl-4-oxo-7-propyl-1,4-dihydroimidazo[5,1-f][1,2,4]triazin-2-yl)benzenesulfonyl chloride (CAS: 224789-26-8)?

4-Ethoxy-3-(5-methyl-4-oxo-7-propyl-1,4-dihydroimidazo[5,1-f][1,2,4]triazin-2-yl...

224789-26-84-Ethoxy-3-(5-methyl...
Compound Q&A

How should Methyl 3-Oxo-4-Androsten-17-Carboxylate (CAS: 2681-55-2) be stored?

Methyl 3-Oxo-4-Androsten-17-Carboxylate (CAS: 2681-55-2) should be stored in a c...

2681-55-2Methyl 3-Oxo-4-Andro...
Compound Q&A

What are the main uses of (R)-3-Amino-4-(3-hexylphenylamino)-4-oxobutylphosphonic acid (CAS: 909725-61-7)?

(R)-3-Amino-4-(3-hexylphenylamino)-4-oxobutylphosphonic acid is primarily used i...

909725-61-7(R)-3-Amino-4-(3-hex...
Compound Q&A

What regulatory guidelines apply to 2-Methyl-2-propanyl 3-amino-3-carbamoyl-1-azetidinecarboxylate (CAS: 1254120-14-3)?

2-Methyl-2-propanyl 3-amino-3-carbamoyl-1-azetidinecarboxylate (CAS: 1254120-14-...

1254120-14-32-Methyl-2-propanyl ...
Compound Q&A

Are there alternatives to (E)-4-(tert-Butoxy)-4-oxobut-2-enoic acid (CAS: 135355-96-3) in synthesis?

There are alternative reagents that can be used in synthesis instead of (E)-4-(t...

135355-96-3(E)-4-(tert-Butoxy)-...
Compound Q&A

What are the physical and chemical properties of [2-(3-Chlorophenyl)-1,3-thiazol-4-yl]methanol (CAS: 121202-20-8)?

[2-(3-Chlorophenyl)-1,3-thiazol-4-yl]methanol (CAS: 121202-20-8) is a crystallin...

121202-20-8[2-(3-Chlorophenyl)-...
166249-17-8Methyl (2S)-[(4S)-2,...
Compound Q&A

What is the market or research trend for 1-Bromo-2-isocyanatoethane (CAS: 42865-19-0)?

The market for 1-Bromo-2-isocyanatoethane (CAS: 42865-19-0) is driven by its use...

42865-19-01-Bromo-2-isocyanato...
Compound Q&A

What are the main uses of 4-Nitro-D-phenylalanine hydrochloride (CAS: 147065-06-3)?

4-Nitro-D-phenylalanine hydrochloride (CAS: 147065-06-3) is primarily used in re...

147065-06-34-Nitro-D-phenylalan...

Source Journal

Physical Chemistry Chemical Physics

Physical Chemistry Chemical Physics
CiteScore: 5.5
Self-citation Rate: 10.3%
Articles per Year: 3036

Physical Chemistry Chemical Physics (PCCP) is an international journal co-owned by 19 physical chemistry and physics societies from around the world. This journal publishes original, cutting-edge research in physical chemistry, chemical physics and biophysical chemistry. To be suitable for publication in PCCP, articles must include significant innovation and/or insight into physical chemistry; this is the most important criterion that reviewers and Editors will judge against when evaluating submissions. The journal has a broad scope and welcomes contributions spanning experiment, theory, computation and data science. Topical coverage includes spectroscopy, dynamics, kinetics, statistical mechanics, thermodynamics, electrochemistry, catalysis, surface science, quantum mechanics, quantum computing and machine learning. Interdisciplinary research areas such as polymers and soft matter, materials, nanoscience, energy, surfaces/interfaces, and biophysical chemistry are welcomed if they demonstrate significant innovation and/or insight into physical chemistry. Joined experimental/theoretical studies are particularly appreciated when complementary and based on up-to-date approaches.

Recommended Compounds

Recommended Suppliers

Disclaimer
This page provides academic journal information for reference and research purposes only. We are not affiliated with any journal publishers and do not handle publication submissions. For publication-related inquiries, please contact the respective journal publishers directly.
If you notice any inaccuracies in the information displayed, please contact us at support@chemtradehub.com. We will promptly review and address your concerns.