Quantum Monte Carlo for noncovalent interactions: an efficient protocol attaining benchmark accuracy

Literature Information

Publication Date 2014-08-01
DOI 10.1039/C4CP02093F
Impact Factor 3.676
Authors

Matúš Dubecký, René Derian, Petr Jurečka, Lubos Mitas, Michal Otyepka


View Original

Abstract

Reliable theoretical prediction of noncovalent interaction energies, which are important e.g. in drug-design and hydrogen-storage applications, is one of the longstanding challenges of contemporary quantum chemistry. In this respect, the fixed-node diffusion Monte Carlo (FN-DMC) method is a promising alternative to the commonly used “gold standard” coupled-cluster CCSD(T)/CBS method due to its benchmark accuracy and favourable scaling, in contrast to other correlated wave function approaches. This work is focused on the analysis of protocols and possible trade-offs for FN-DMC estimations of noncovalent interaction energies, and proposes an efficient yet accurate computational protocol using simplified explicit correlation terms with a favorable O(N3) scaling. It achieves results in excellent agreement (mean unsigned error ∼0.2 kcal mol−1) with respect to the CCSD(T)/CBS data on a number of complexes, including benzene/hydrogen, the T-shape benzene dimer, stacked adenine–thymine complex and a set of small noncovalent complexes (A24). The high accuracy and reduced computational costs predestinate the reported protocol for practical interaction energy calculations of large noncovalent complexes, where the CCSD(T)/CBS is prohibitively expensive.

Related Literature

Label-free, ITO-based immunosensor for the detection of a cancer biomarker: Receptor for Activated C Kinase 1

E. B. Bahadır, M. K. Sezgintürk

2016-07-13 Paper

DOI: 10.1039/C6AN00694A

IR and Raman imaging of murine brains from control and ApoE/LDLR−/− mice with advanced atherosclerosis

Karolina Chrabaszcz, Edyta Maslak, Katarzyna M. Marzec

2016-06-08 Paper

DOI: 10.1039/C6AN00107F

Front cover

Cover

DOI: 10.1039/C6AN90065H

Back cover

Cover

DOI: 10.1039/C6AN90082H

A silicon nitride ISFET based immunosensor for Ag85B detection of tuberculosis

Pawasuth Saengdee, Woraphan Chaisriratanakul, Win Bunjongpru, Witsaroot Sripumkhai, Awirut Srisuwan, Charndet Hruanun, Amporn Poyai, Ponrut Phunpae, Wutthinan Jeamsaksiri, Chamras Promptmas

2016-07-25 Paper

DOI: 10.1039/C6AN00568C

High throughput LSPR and SERS analysis of aminoglycoside antibiotics

Kristy S. McKeating, Maxime Couture, Marie-Pier Dinel, Sylvie Garneau-Tsodikova, Jean-Francois Masson

2016-07-05 Paper

DOI: 10.1039/C6AN00540C

Surface-enhanced Raman scattering

2016-07-19 Editorial

DOI: 10.1039/C6AN90064J

A ratiometric two-photon fluorescent probe for fluoride ion imaging in living cells and zebrafish

Wei Hu, Lingyu Zeng, Yanying Wang, Zhihong Liu, Xiaoxue Ye, Chunya Li

2016-06-15 Paper

DOI: 10.1039/C6AN00905K

You might also like

Compound Q&A

What precautions should be taken when handling 2-Chloro-1,2-bis(4-methylphenyl)ethanone (CAS: 71193-32-3)?

When handling 2-Chloro-1,2-bis(4-methylphenyl)ethanone (CAS: 71193-32-3), it is ...

71193-32-32-Chloro-1,2-bis(4-m...
Compound Q&A

What industries use 4-Ethoxy-3-(5-methyl-4-oxo-7-propyl-1,4-dihydroimidazo[5,1-f][1,2,4]triazin-2-yl)benzenesulfonyl chloride (CAS: 224789-26-8)?

4-Ethoxy-3-(5-methyl-4-oxo-7-propyl-1,4-dihydroimidazo[5,1-f][1,2,4]triazin-2-yl...

224789-26-84-Ethoxy-3-(5-methyl...
Compound Q&A

How should Methyl 3-Oxo-4-Androsten-17-Carboxylate (CAS: 2681-55-2) be stored?

Methyl 3-Oxo-4-Androsten-17-Carboxylate (CAS: 2681-55-2) should be stored in a c...

2681-55-2Methyl 3-Oxo-4-Andro...
Compound Q&A

What are the main uses of (R)-3-Amino-4-(3-hexylphenylamino)-4-oxobutylphosphonic acid (CAS: 909725-61-7)?

(R)-3-Amino-4-(3-hexylphenylamino)-4-oxobutylphosphonic acid is primarily used i...

909725-61-7(R)-3-Amino-4-(3-hex...
Compound Q&A

What regulatory guidelines apply to 2-Methyl-2-propanyl 3-amino-3-carbamoyl-1-azetidinecarboxylate (CAS: 1254120-14-3)?

2-Methyl-2-propanyl 3-amino-3-carbamoyl-1-azetidinecarboxylate (CAS: 1254120-14-...

1254120-14-32-Methyl-2-propanyl ...
Compound Q&A

Are there alternatives to (E)-4-(tert-Butoxy)-4-oxobut-2-enoic acid (CAS: 135355-96-3) in synthesis?

There are alternative reagents that can be used in synthesis instead of (E)-4-(t...

135355-96-3(E)-4-(tert-Butoxy)-...
Compound Q&A

What are the physical and chemical properties of [2-(3-Chlorophenyl)-1,3-thiazol-4-yl]methanol (CAS: 121202-20-8)?

[2-(3-Chlorophenyl)-1,3-thiazol-4-yl]methanol (CAS: 121202-20-8) is a crystallin...

121202-20-8[2-(3-Chlorophenyl)-...
166249-17-8Methyl (2S)-[(4S)-2,...
Compound Q&A

What is the market or research trend for 1-Bromo-2-isocyanatoethane (CAS: 42865-19-0)?

The market for 1-Bromo-2-isocyanatoethane (CAS: 42865-19-0) is driven by its use...

42865-19-01-Bromo-2-isocyanato...
Compound Q&A

What are the main uses of 4-Nitro-D-phenylalanine hydrochloride (CAS: 147065-06-3)?

4-Nitro-D-phenylalanine hydrochloride (CAS: 147065-06-3) is primarily used in re...

147065-06-34-Nitro-D-phenylalan...

Source Journal

Physical Chemistry Chemical Physics

Physical Chemistry Chemical Physics
CiteScore: 5.5
Self-citation Rate: 10.3%
Articles per Year: 3036

Physical Chemistry Chemical Physics (PCCP) is an international journal co-owned by 19 physical chemistry and physics societies from around the world. This journal publishes original, cutting-edge research in physical chemistry, chemical physics and biophysical chemistry. To be suitable for publication in PCCP, articles must include significant innovation and/or insight into physical chemistry; this is the most important criterion that reviewers and Editors will judge against when evaluating submissions. The journal has a broad scope and welcomes contributions spanning experiment, theory, computation and data science. Topical coverage includes spectroscopy, dynamics, kinetics, statistical mechanics, thermodynamics, electrochemistry, catalysis, surface science, quantum mechanics, quantum computing and machine learning. Interdisciplinary research areas such as polymers and soft matter, materials, nanoscience, energy, surfaces/interfaces, and biophysical chemistry are welcomed if they demonstrate significant innovation and/or insight into physical chemistry. Joined experimental/theoretical studies are particularly appreciated when complementary and based on up-to-date approaches.

Recommended Compounds

Recommended Suppliers

Disclaimer
This page provides academic journal information for reference and research purposes only. We are not affiliated with any journal publishers and do not handle publication submissions. For publication-related inquiries, please contact the respective journal publishers directly.
If you notice any inaccuracies in the information displayed, please contact us at support@chemtradehub.com. We will promptly review and address your concerns.