Comparing efficiencies of genetic and minima hopping algorithms for crystal structure prediction

Literature Information

Publication Date 2010-08-16
DOI 10.1039/C004096G
Impact Factor 3.676
Authors

Min Ji, Cai-Zhuang Wang, Kai-Ming Ho


View Original

Abstract

In this work several crystal structure prediction problems which have been studied by first-principles evolutionary algorithms recently are revisited. We increased the system size to see how the search efficiency changes with respect to problem size. We find that the relative performance and underlying mechanism of genetic algorithms in crystal structure searches for AlxSc1−x strongly depend on the system composition as well as the size of the problem. Because of this strong dependence, caution should be taken in generalizing performance comparison from one problem to another even though they may appear to be similar. We also investigate the performance of the search algorithm for crystal structure prediction of boron with and without a priori knowledge of the lattice vectors. The results show that the degree of difficulty increases dramatically if the lattice vectors of the crystal are allowed to vary during the search. Comparison of the minima hopping algorithm with the genetic algorithm at small (<10 atoms) to larger problem sizes is also carried out. At the small sizes we have tested, both methods show comparable efficiency. But at large sizes the genetic algorithm becomes advantageous over minima hopping.

Related Literature

Speciation of adsorbed CO2 on metal oxides by a new 2-dimensional approach: 2D infrared inversion spectroscopy (2D IRIS)

Sergey Sirotin, Philippe Bazin, Françoise Maugé, Arnaud Travert

2013-04-17 Paper

DOI: 10.1039/C3CP51146D

An ab initio investigation of Li2M0.5N0.5SiO4 (M, N = Mn, Fe, Co Ni) as Li-ion battery cathode materials

Sirous Asgari, Doretta Capsoni, Piercarlo Mustarelli

2013-04-23 Communication

DOI: 10.1039/C3CP51481A

Back cover

Cover

DOI: 10.1039/C3CP90065G

The fast Z-scan method for studying working catalytic reactors with high energy X-ray diffraction: ZSM-5 in the methanol to gasoline process

David S. Wragg, Francesca L. Bleken, Matthew G. O'Brien, Marco Di Michiel, Helmer Fjellvåg, Unni Olsbye

2013-03-18 Paper

DOI: 10.1039/C3CP44343D

An all-cotton-derived, arbitrarily foldable, high-rate, electrochemical supercapacitor

Jiangli Xue, Yang Zhao, Huhu Cheng, Chuangang Hu, Yue Hu, Yuning Meng, Huibo Shao, Zhipan Zhang, Liangti Qu

2013-04-15 Communication

DOI: 10.1039/C3CP51571K

Tandem cathode for proton exchange membrane fuel cells

Samira Siahrostami, Mårten E. Björketun, Peter Strasser, Jeff Greeley, Jan Rossmeisl

2013-04-22 Paper

DOI: 10.1039/C3CP51479J

Synchrotron high energy X-ray methods coupled to phase sensitive analysis to characterize aging of solid catalysts with enhanced sensitivity

Mark A. Newton, Marco Di Michiel, Songhak Yoon, Gian Luca Chiarello, Santhosh Kumar Matam, Myriam H. Aguirre, Anke Weidenkaff, Fei Wen, Jürgen Gieshoff

2013-04-26 Paper

DOI: 10.1039/C3CP44638G

Nonlinear length dependent electrical resistance of a single crystal zinc oxide micro/nanobelt

Chaolong Tang, Chengming Jiang, Wenqiang Lu, Jinhui Song

2013-04-05 Paper

DOI: 10.1039/C3CP50679G

Effects of rare-earth co-doping on the local structure of rare-earth phosphate glasses using high and low energy X-ray diffraction

Vicky FitzGerald, Veijo Honkimaki, Mark A. Roberts, Tessa Brennan, Richard A. Martin, George A. Saunders, Robert J. Newport

2013-03-06 Paper

DOI: 10.1039/C3CP44298E

Study of the tryptophan–terbium FRET pair coupled to silver nanoprisms for biosensing applications

Ane K. di Gennaro, Leonid Gurevich, Esben Skovsen, Michael T. Overgaard, Peter Fojan

2013-04-16 Paper

DOI: 10.1039/C3CP50742D

You might also like

Compound Q&A

What precautions should be taken when handling 2-Chloro-1,2-bis(4-methylphenyl)ethanone (CAS: 71193-32-3)?

When handling 2-Chloro-1,2-bis(4-methylphenyl)ethanone (CAS: 71193-32-3), it is ...

71193-32-32-Chloro-1,2-bis(4-m...
Compound Q&A

What industries use 4-Ethoxy-3-(5-methyl-4-oxo-7-propyl-1,4-dihydroimidazo[5,1-f][1,2,4]triazin-2-yl)benzenesulfonyl chloride (CAS: 224789-26-8)?

4-Ethoxy-3-(5-methyl-4-oxo-7-propyl-1,4-dihydroimidazo[5,1-f][1,2,4]triazin-2-yl...

224789-26-84-Ethoxy-3-(5-methyl...
Compound Q&A

How should Methyl 3-Oxo-4-Androsten-17-Carboxylate (CAS: 2681-55-2) be stored?

Methyl 3-Oxo-4-Androsten-17-Carboxylate (CAS: 2681-55-2) should be stored in a c...

2681-55-2Methyl 3-Oxo-4-Andro...
Compound Q&A

What are the main uses of (R)-3-Amino-4-(3-hexylphenylamino)-4-oxobutylphosphonic acid (CAS: 909725-61-7)?

(R)-3-Amino-4-(3-hexylphenylamino)-4-oxobutylphosphonic acid is primarily used i...

909725-61-7(R)-3-Amino-4-(3-hex...
Compound Q&A

What regulatory guidelines apply to 2-Methyl-2-propanyl 3-amino-3-carbamoyl-1-azetidinecarboxylate (CAS: 1254120-14-3)?

2-Methyl-2-propanyl 3-amino-3-carbamoyl-1-azetidinecarboxylate (CAS: 1254120-14-...

1254120-14-32-Methyl-2-propanyl ...
Compound Q&A

Are there alternatives to (E)-4-(tert-Butoxy)-4-oxobut-2-enoic acid (CAS: 135355-96-3) in synthesis?

There are alternative reagents that can be used in synthesis instead of (E)-4-(t...

135355-96-3(E)-4-(tert-Butoxy)-...
Compound Q&A

What are the physical and chemical properties of [2-(3-Chlorophenyl)-1,3-thiazol-4-yl]methanol (CAS: 121202-20-8)?

[2-(3-Chlorophenyl)-1,3-thiazol-4-yl]methanol (CAS: 121202-20-8) is a crystallin...

121202-20-8[2-(3-Chlorophenyl)-...
166249-17-8Methyl (2S)-[(4S)-2,...
Compound Q&A

What is the market or research trend for 1-Bromo-2-isocyanatoethane (CAS: 42865-19-0)?

The market for 1-Bromo-2-isocyanatoethane (CAS: 42865-19-0) is driven by its use...

42865-19-01-Bromo-2-isocyanato...
Compound Q&A

What are the main uses of 4-Nitro-D-phenylalanine hydrochloride (CAS: 147065-06-3)?

4-Nitro-D-phenylalanine hydrochloride (CAS: 147065-06-3) is primarily used in re...

147065-06-34-Nitro-D-phenylalan...

Source Journal

Physical Chemistry Chemical Physics

Physical Chemistry Chemical Physics
CiteScore: 5.5
Self-citation Rate: 10.3%
Articles per Year: 3036

Physical Chemistry Chemical Physics (PCCP) is an international journal co-owned by 19 physical chemistry and physics societies from around the world. This journal publishes original, cutting-edge research in physical chemistry, chemical physics and biophysical chemistry. To be suitable for publication in PCCP, articles must include significant innovation and/or insight into physical chemistry; this is the most important criterion that reviewers and Editors will judge against when evaluating submissions. The journal has a broad scope and welcomes contributions spanning experiment, theory, computation and data science. Topical coverage includes spectroscopy, dynamics, kinetics, statistical mechanics, thermodynamics, electrochemistry, catalysis, surface science, quantum mechanics, quantum computing and machine learning. Interdisciplinary research areas such as polymers and soft matter, materials, nanoscience, energy, surfaces/interfaces, and biophysical chemistry are welcomed if they demonstrate significant innovation and/or insight into physical chemistry. Joined experimental/theoretical studies are particularly appreciated when complementary and based on up-to-date approaches.

Recommended Compounds

Recommended Suppliers

Disclaimer
This page provides academic journal information for reference and research purposes only. We are not affiliated with any journal publishers and do not handle publication submissions. For publication-related inquiries, please contact the respective journal publishers directly.
If you notice any inaccuracies in the information displayed, please contact us at support@chemtradehub.com. We will promptly review and address your concerns.