Light emission colour modulation study of oxyluciferin synthetic analogues via QM and QM/MM approaches
Literature Information
Madjid Zemmouche, Isabelle Navizet
Firefly oxyluciferin is the chemical product of bioluminescence responsible for light emission. Experiments have already shown that different analogues of natural oxyluciferin, exhibit different emission colours. In particular, the structure of natural oxyluciferin has been modified by atom or group substitutions. However, a rationalization of the origin of the bioluminescence emission colour modulation of these analogues has still not been reported. For these reasons, the aim of this study is to explain the influence of structural modifications within the natural oxyluciferin on the colour modulation of bioluminescence. To do this, natural firefly oxyluciferin and three synthetic analogues whose experimental bioluminescence spectra are red- and blue-shifted compared to the natural one were studied. The absorption and emission transition energies have been calculated at the Time-dependent density functional theory (TD-DFT) level using both quantum mechanics (QM) and quantum mechanics/molecular mechanics (QM/MM) methods. Moreover, the solvent (water using the PCM model) and the protein surrounding effect have also been considered. The predicted emission spectra are in quite good agreement with the available experimental spectra, validating the methodology followed in this study. In particular, it was demonstrated that using the QM/MM approach, and considering explicitly the protein environment, the experimental bioluminescence spectra can be reproduced. Furthermore, this study shows that the substitution within the oxyluciferin structure causes a change of its electronic distribution and energies of the HOMO and LUMO orbitals involved in the vertical transitions, leading to different light emission colours. This work will promote future studies focused on luciferin mutations guided by the prediction of their bioluminescence emission spectra.
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Physical Chemistry Chemical Physics (PCCP) is an international journal co-owned by 19 physical chemistry and physics societies from around the world. This journal publishes original, cutting-edge research in physical chemistry, chemical physics and biophysical chemistry. To be suitable for publication in PCCP, articles must include significant innovation and/or insight into physical chemistry; this is the most important criterion that reviewers and Editors will judge against when evaluating submissions. The journal has a broad scope and welcomes contributions spanning experiment, theory, computation and data science. Topical coverage includes spectroscopy, dynamics, kinetics, statistical mechanics, thermodynamics, electrochemistry, catalysis, surface science, quantum mechanics, quantum computing and machine learning. Interdisciplinary research areas such as polymers and soft matter, materials, nanoscience, energy, surfaces/interfaces, and biophysical chemistry are welcomed if they demonstrate significant innovation and/or insight into physical chemistry. Joined experimental/theoretical studies are particularly appreciated when complementary and based on up-to-date approaches.
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